Tools for modeling and analyzing 3D genomes.

Building 3D genomes.

TADbit is a computational package that uses 3C-based data to detect, model and analyze the structure of genomes and genomic domains.

Visualizing 3D genomes.

TADkit is a visualizer for 3D genomic data that helps researchers to easy annotate 3D models generated by TADbit.  

Link to datasets for developers of methods of 3D Genome building and a list of other methods for 3D genomics.