Nir, Farabella, Perez-Estrada and Ebeling et al 2018 Dataset

Download a ZIP file (68Mb) that contains the OligoSTORM density maps and the IMGR models described in the article:

"Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling".
by Nir, Farabella, Pérez-Estrada, Ebeling, Beliveau, Sasaki, Lee, Nguyen, McCole, Chattoraj, Erceg, AlHaj-Abed, Martins,
Nguyen, Hannan, Russell, Durand, Rao, Kishi, Soler-Vila, Di Pierro, Onuchic, Callahan, Schreiner, Stuckey, Yin, Lieberman-Aiden,
Marti-Renom, and Wu. Submitted for publication. (2018)

For additional information refer to the README in the Zip file.


Serra et al 2015 Dataset

Browse the 50 modeled regions of the fly genome described in the article:

"Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors".
by François Serra, Davide Baù, et al (2017) PLOS Computational Biology 13(7) e1005665. 10.1371/journal.pcbi.1005665



Trussart et al 2015 Dataset

Download a ZIP file (67Mb) that contains all the data described in the article:

"Assessing the limits of restraint-based 3D modeling of genomes and genomic domains".
by Marie Trussart, Francois Serra, Davide Baù, Ivan Junier, Luis Serrano and Marc A. Marti-Renom. NAR. (2015) doi: 10.1093/nar/gkv221

For additional information refer to the article or the README in the Zip file.