#SCOR DATASET 419 CHAINS #PDB CHAIN FUNCTION 1zih A GNRA_tetraloop 1q81 A 23S_rRNAwithPuromycin 1b36 A Hairpin_ribozyme 1r2p A Group_II_self-splicing_intron 1na2 A telomeraseRNA 1nwy 9 5S_rRNA_in_50S_subunit 1k4a A RNAloop 1nwy 0 23S_rRNAwithAzithromycin 1tfn A R17_phage_coat_protein_binding_stem-loop 1q81 B 5S_rRNA_in_50S_subunit 1ibk A 16S_rRNAwithParomomycin 1qvf 3 Individual_stems_or_stem-loop_tRNA_(Phe)_T-Psi-C_stem-loop 1qvf 0 23SrRNA_wDeacylatedtRNAminihelix 1qvf 9 5S_rRNA_in_50S_subunit 1nz1 A U6_snRNA 2bu1 S RNAHairpinComplexMS2CoatProtein 2bu1 R RNAHairpinComplexMS2CoatProtein 1o0b B aminoacyl_tRNA 1k8w B Individual_stems_or_stem-loop_tRNA_(Phe)_T-Psi-C_stem-loop 1e8o E ALURNA5Domain 1kpy A P1P2FragmenshiftingPseudoknotPEAEnationMosaicVirusTypeI 1m82 A InfluenzaAVirusC4Promoter 1pbr A A_site 1gts B Synthetase_complexe_tRNA_(Gln) 1p5n A InternalRibosomeEntrySite 1fhk A 16SConserved690Hairpin 2tob A Tobramycin_binding 1a4t A Phage_transcriptional_antitermination_hairpin 1euy B Synthetase_complexe_tRNA_(Gln) 1scl A 28S_rRNA_Sarcin_/_ricin_loop 1tra A tRNA_(Phe) 1f7g A RNAsePRNAP4Stem 1nbr A Iron_responsive_element 1fl8 A Individual_stems_or_stem-loop_tRNA_(Lys)_anticodon_stem-loop 1hnz A 16S_rRNAwithHygromycinB 1sy4 A U6_snRNA 1zdi S MS2_phage_coat_protein_binding_stem-loop 1f7y B Helix_20_21_22 1kc8 B 5S_rRNA_in_50S_subunit 1bn0 A HIV-1_Psi_RNA_recognition_element 1e4p A VSRibozymeSubstrateStemLoop 1dk1 B Central_domain,_complex_with_protein 1ibl A 16S_rRNAwithParomomycin 1e7k C U4_snRNA 1jzx A 23S_rRNAwithClindamycin 1nc0 A U6_snRNA 1jid B Helix_6 1zif A GNRA_tetraloop 299d B Hammerhead_ribozyme 379d B Hammerhead_ribozyme 1uui B HIV_TAR_RNA 1nbk A HIV-1_tat_binding 2c51 R MS2_phage_coat_protein_binding_stem-loop 1l9a B SRPRNASdomain 1i4c A Brome_mosaic_virus_tRNA-like_sequence 1i3y A Peptidyl_transferase_center_conserved_hairpin_A_loop 1l1c C mRNAAntiterminatorHairpin 1il2 C Synthetase_complexe_tRNA_(Asp) 1mnb B BIV_TAR_RNA 1k9m A 23S_rRNAFreeForm 1lvj A HIV_TAR_RNA 1b23 R Complexes_with_EF-Tu_tRNA_(Cys) 1ehz A tRNA_(Phe) 1o15 A Theophylline_binding 1wts A Helix_45 1bzu A Individual_stems_or_stem-loop_tRNA_(Lys)_anticodon_stem-loop 1g1x I Central_domain,_complex_with_protein 1g1x J Central_domain,_complex_with_protein 1tn2 A tRNA_(Phe) 1uuu A Hairpin_loop_containing_UUU 1g1x D Central_domain,_complex_with_protein 1g1x E Central_domain,_complex_with_protein 1q82 B 5S_rRNA_in_50S_subunit 1f84 A InternalRibosomeEntrySite 1dul B Domain_IV,_complex_with_Ffh_protein_M_domain 1qfq A Phage_transcriptional_antitermination_hairpin 1hs2 A S2(G8)Hairpin 1j5a A 23S_rRNAwithClyarithromycin 1fqz A InternalRibosomeEntrySite 1esh A Brome_mosaic_virus_tRNA-like_sequence 1aq3 R MS2_phage_coat_protein_binding_stem-loop 1s9s A Retrovirus_dimerization_initiation_site 1anr A HIV_TAR_RNA 1kis B HIV-2_TAR_hairpin_loop 1hmh A Hammerhead_ribozyme 1qwb A NUCLEOLIN_binding 1mfj A U4_snRNA 1fyp A 18rRNAASiteComplexParmomycin 2tra A Elongator_tRNA_(Asp) 1ooa D NFKB_binding 1ooa C NFKB_binding 1mt4 A 23SRibosomalRNAHairpin35 1msy A 23S_rRNA_Sarcin_/_ricin_loop 1fjg A 16S_rRNAwithStreptomycinSpectinomycinParomomycin 1f6x A RNAsePRNAP4Stem 1kpz A P1P2FragmenshiftingPseudoknotPEAEnationMosaicVirusTypeI 1rng A Loop_83 1lng B SRPRNASdomain 1h4s T Synthetase_complexe_tRNA_(Pro) 1j4y A AnticodonStem-loop_tRNA_(Phe) 1n34 A 16S_rRNAwithMessengerRNA 1f7h A RNAsePRNAP4Stem 1p5o A InternalRibosomeEntrySite 1jur A Helix_III 1ei2 A Tau_exon_10_splicing_regulatory_element 1kaj A Mouse_Mammary_Tumor_Virus 1bvj A HIV-1_A-rich_RNA_loop 2iz9 S MS2_phage_coat_protein_binding_stem-loop 2iz9 R MS2_phage_coat_protein_binding_stem-loop 1evv A tRNA_(Phe) 1ikd A Individual_stems_or_stem-loop_tRNA_(Ala)_acceptor_stem 1njo 0 23S_rRNAwithAccpuromycin 1f7f A RNAsePRNAP4Stem 1vop A Peptidyl_transferase_center_conserved_hairpin_P_loop 1m90 B 5S_rRNA_in_50S_subunit 1m90 A 23S_rRNAwithSparsomycin 1qvg 0 23SrRNA_wCCAoligo 1gid A G1intronP4P6 1gid B G1intronP4P6 1j5e A 16S_rRNAFreeForm 1f1t A Malachite_green_binding 1n32 A 16S_rRNAwithParomomycin 1nkw 9 5S_rRNA_in_50S_subunit 1gtr B Synthetase_complexe_tRNA_(Gln) 1nkw 0 23S_rRNAFreeForm 1ibm A 16S_rRNAwithMessengerRNA 1mme D Hammerhead_ribozyme 2c4z R RNAHairpinComplexMS2CoatProtein 1mme B Hammerhead_ribozyme 1zig A GNRA_tetraloop 1i46 A Brome_mosaic_virus_tRNA-like_sequence 1sm1 0 23SrRNA_wQuinupristinAndDalfopristin 1sm1 9 5S_rRNA_in_50S_subunit 1q86 A 23SrRNA_wCCA-Phe_CAP-biotin 1q86 B 5S_rRNA_in_50S_subunit 1o0c B Synthetase_complexe_tRNA_(Gln) 1zdi R MS2_phage_coat_protein_binding_stem-loop 1k9w A Retrovirus_dimerization_initiation_site 1exy A T-cell_leukemia_virus_Rex_protein_binding 1k4b A RNAloop 1bgz A Binding_site_for_protein_S8 1ajf A G1intronBulgeLoop 1qu2 T Synthetase_complexe_tRNA_(Ile) 1hmh C Hammerhead_ribozyme 1hmh E Hammerhead_ribozyme 1ik1 A HRV14StemLoopDhairpin 1ebq A HIV-1_Rev_response_element_Rev_binding_site 5msf R Phage_coat_protein_binding 5msf S Phage_coat_protein_binding 1hs3 A S2(G8)Hairpin 1afx A UGAA_tetraloop 6msf R Phage_coat_protein_binding 1jj2 0 23S_rRNAFreeForm 1e95 A SRV1RNAPseudoknotInvolvedRibosomalFragmeshifting 1c0o A G1intronP5StemLoop 1jj2 9 5S_rRNA_in_50S_subunit 1ie2 A NUCLEOLIN_binding 1bz3 A Individual_stems_or_stem-loop_tRNA_(Lys)_anticodon_stem-loop 1mji C RibosomalProteinL5/5DrRNAComplex 1m5p B Hairpin_ribozyme 1mzp B L1ProtuberanceInRheRibosome 1qrs B Synthetase_complexe_tRNA_(Gln) 1f6u B HIV-1_PSIRNA_STEM_LOOP_SL1 1hr0 A 16S_rRNAwithTranslationInitiationFactor 2ldz A Lead-dependent_self-cleaving 1c0a B Synthetase_complexe_tRNA_(Asp) 1m5l A HIV-1_PSIRNA_STEM_LOOP_SL1 1jbt C 23S_rRNA_Sarcin_/_ricin_loop 28sr A Domain_IV 1s72 0 23S_rRNAFreeForm 1pjy A HIV-1_frameshift_stemloop 1s72 9 5S_rRNA_in_50S_subunit 1ec6 D Nova_protein_K_homology_domain_binding 1jzz A 23S_rRNAwithRoxithromycin 1ser T Synthetase_complexe_tRNA_(Ser) 1q2s E AnticodonStem-loop_tRNA_(Phe) 361d A Loop_E 361d B Loop_E 1njp 0 23S_rRNAFreeForm 1luu A AnticodonStem-loop_tRNA_(Phe) 1njp 5 Individual_stems_or_stem-loop_tRNA_(Ala)_acceptor_stem 1i3x A Peptidyl_transferase_center_conserved_hairpin_A_loop 1biv A BIV_TAR_RNA 1qtq B Synthetase_complexe_tRNA_(Gln) 1nbs B RibonucleaseP 1f7u B Synthetase_complexe_tRNA_(Arg) 1osw A HIV-1_PSIRNA_STEM_LOOP_SL1 1qf6 B Synthetase_complexe_tRNA_(Thr) 1kis A HIV-2_TAR_hairpin_loop 4tra A tRNA_(Phe) 1jzc A Brome_mosaic_virus_tRNA-like_sequence 1kos A Individual_stems_or_stem-loop_tRNA_(Phe)_T-Psi-C_stem-loop 1bzt A Individual_stems_or_stem-loop_tRNA_(Lys)_anticodon_stem-loop 1slo A Spliced_leader_RNA 2iz8 R MS2_phage_coat_protein_binding_stem-loop 1feq A Individual_stems_or_stem-loop_tRNA_(Lys)_anticodon_stem-loop 1d0u A MS2_phage_coat_protein_binding_stem-loop 1d6k B Loop_E,_complex_with_protein_L25 1hnx A 16S_rRNAwithPactamycin 1hji A NutboxBRNAComplexWithNUNProtein 1ffz A 23SRibosomalDomainVComplexrCCDAPuromycin 1l1w A Helix_6 2tpk A BacteriophageT2_pseudoknot 1p6v D tmRNA 1p6v B tmRNA 1q75 A telomeraseRNA 1i9v A ComplexWithNEOMYCIN_tRNA_(Phe) 1rht A R17_phage_coat_protein_binding_stem-loop 1akx A HIV_TAR_RNA 1h3e B Synthetase_complexe_tRNA_(Thr) 1qwa A Pre-ribosomal_RNA 1byj A A_site 1mfk A SecisMRNAHairpin 2c4y S RNAHairpinComplexMS2CoatProtein 2c4y R RNAHairpinComplexMS2CoatProtein 484d B HIV-1_rev_peptide_binding 1zdh R MS2_phage_coat_protein_binding_stem-loop 1zdh S MS2_phage_coat_protein_binding_stem-loop 1hq1 B Domain_IV,_complex_with_Ffh_protein_M_domain 1am0 A ATP_binding 1n8r A 23SrRNA_wVirginiamycinM 1n8r B 5S_rRNA_in_50S_subunit 1njn 0 23S_rRNAwithSparsomycin 1efw D Synthetase_complexe_tRNA_(Asp) 1tlr A GAAATetraloopReceptor 4tna A tRNA_(Phe) 1efw C Synthetase_complexe_tRNA_(Asp) 1k5i A CUCAAPentaloop 1g59 B Synthetase_complexe_tRNA_(Glu) 1nyi B Hammerhead_ribozyme 1hs4 A S2(G8)Hairpin 1f27 A Biotin_binding 1kc8 A 23SrRNA_wBlasticidinS 1f9l A G1intronP5StemLoop 1cx0 B Hepatitis_delta_virus_self-cleaving_ribozyme 1jtj A HIV-1_PSIRNA_STEM_LOOP_SL1 1mms D GTPase-associated_region,_complex_with_L11_protein 1mms C GTPase-associated_region,_complex_with_L11_protein 1f5u A Retrovirus_dimerization_initiation_site 1f5u B Retrovirus_dimerization_initiation_site 1etf A HIV-1_Rev_response_element_Rev_binding_site 1gax C Synthetase_complexe_tRNA_(Val) 1l8v A G1intronP4P6 1q9a A 23S_rRNA_Sarcin_/_ricin_loop 1ie1 A NUCLEOLIN_binding 1f7i A RNAsePRNAP4Stem 359d B Hammerhead_ribozyme 1bz2 A Individual_stems_or_stem-loop_tRNA_(Lys)_anticodon_stem-loop 1raw A ATP_binding 1bau A Retrovirus_dimerization_initiation_site 1kqs 9 5S_rRNA_in_50S_subunit 1q8n A Malachite_green_binding 1kqs 0 23S_rRNAwithPuromycin 1ekz B Staufen_protein_binding_stem-loop 1asz R Synthetase_complexe_tRNA_(Asp) 1asz S Synthetase_complexe_tRNA_(Asp) 1a1t B HIV-1_Psi_RNA_recognition_element 1cq5 A Domain_IV 1g70 A HIV-1RRE-IIBComplexRSGPeptide 1m1k B 5S_rRNA_in_50S_subunit 1m1k A 23S_rRNAFreeForm 1n77 C Synthetase_complexe_tRNA_(Glu) 1un6 F 5S-ZnFinger 1un6 E 5S-ZnFinger 6tna A tRNA_(Phe) 1exd B Synthetase_complexe_tRNA_(Gln) 1j2b D tRNAWithTransglycosylase 1eor A G1intronP5StemLoop 1kka A AnticodonStem-loop_tRNA_(Phe) 1j2b C tRNAWithTransglycosylase 1lc6 A U6_snRNA 1f6z A RNAsePRNAP4Stem 1q93 C 28S_rRNA_Sarcin_/_ricin_loop 1q93 B 28S_rRNA_Sarcin_/_ricin_loop 1q93 A 28S_rRNA_Sarcin_/_ricin_loop 1nem A Neomycin_binding 1ec6 C Nova_protein_K_homology_domain_binding 1q7y B 5S_rRNA_in_50S_subunit 1q7y A 23SrRNA_wPeptidylTransferaseCenter 1aud B U1A_polyadenylation_inhibition_element 1kks A HistoneMRNAStem-loop 1f7v B Synthetase_complexe_tRNA_(Arg) 1p5m A InternalRibosomeEntrySite 1jo7 A InfluenzaAVirusC4Promoter 2izm R MS2_phage_coat_protein_binding_stem-loop 1f78 A RNAsePRNAP4Stem 1hs1 A S2(G8)Hairpin 1ebr A HIV-1_Rev_response_element_Rev_binding_site 1k73 B 5S_rRNA_in_50S_subunit 1k73 A 23SrRNA_wAnisomycin 1nwx 9 5S_rRNA_in_50S_subunit 1hlx A G1intronP1helix 437d A WesternYellowVirusFragmenshiftingmRNAPseudoknot 1nwx 0 23S_rRNAwithCethromycin 3php A Turnip_yellow_mosaic_virus_tRNA-like_pseudoknot 2fmt D Transformylase_complex 1fg0 A 23SRibosomalDomainVComplexMinihelixPuromycinCompound 2fmt C Transformylase_complex 1aqo A Iron_responsive_element 1arj N HIV_TAR_RNA 1qa6 C GTPase-associated_region,_complex_with_L11_protein 1uts B HIV_TAR_RNA 1p5p A InternalRibosomeEntrySite 1hwq A VSRibozymeSubstrateStemLoop 1bau B Retrovirus_dimerization_initiation_site 2c50 S RNAHairpinComplexMS2CoatProtein 2c50 R RNAHairpinComplexMS2CoatProtein 1m5o B Hairpin_ribozyme 1q29 B Hammerhead_ribozyme 1kxk A Group_II_self-splicing_intron 1jzy A 23S_rRNAwithErythromycinA 1lux A AnticodonStem-loop_tRNA_(Phe) 1ddy C B12_binding 1ddy A B12_binding 1ddy G B12_binding 1ddy E B12_binding 1rfr A CoxsackieVirusRNA 2bj2 A ColE1_plasmid_copy_control_RNA 1ull A HIV-1_rev_peptide_binding 1j1u B Synthetase_complexe_tRNA_(Phe) 2bj2 B ColE1_plasmid_copy_control_RNA 1kd1 B 5S_rRNA_in_50S_subunit 1kd1 A 23S_rRNAwithSpiramycinI 1fje A NUCLEOLIN_binding 1f85 A InternalRibosomeEntrySite 1n33 A 16S_rRNAwithParomomycin 1ond 0 23S_rRNAwithTroleandomycin 1mfy A InfluenzaAVirusC4Promoter 1i94 A 16S_rRNAwithTetracycline 1jox A LP5.1Hairpin 1kog I DomainD2OfThreonyltRNASynthetaseMRNAOperator 1qd3 A HIV_TAR_RNA 1jwc A HistoneMRNAStem-loop 1eht A Theophylline_binding 1a60 A Turnip_yellow_mosaic_virus_tRNA-like_pseudoknot 1h4q T Synthetase_complexe_tRNA_(Pro) 1k9m B 5S_rRNA_in_50S_subunit 1fmn A FMN_binding 1kp7 A InternalRibosomeEntrySite 1ju7 A HistoneMRNAStem-loop 1mnx A Loop_E 1k9w C Retrovirus_dimerization_initiation_site 1k9w B Retrovirus_dimerization_initiation_site 1k9w D Retrovirus_dimerization_initiation_site 1eiy C Synthetase_complexe_tRNA_(Phe) 1fyo A 18rRNAAsite 1m5v B Hairpin_ribozyme 1qvg 9 5S_rRNA_in_50S_subunit 1njm 0 23S_rRNAwithSparsomycin 1njm 5 Individual_stems_or_stem-loop_tRNA_(Ala)_acceptor_stem 1nbs A RibonucleaseP 1n8x A HIV-1_PSIRNA_STEM_LOOP_SL1 1d0t A MS2_phage_coat_protein_binding_stem-loop 1ffy T Synthetase_complexe_tRNA_(Ile) 17ra A GA_phage_coat_protein_binding_stem-loop 1p9x 0 23SrRNA_wTelithromycin 1l3d A WesternYellowVirusRNA 2a9l A Substrate_for_archaeal_pre-tRNA_splicing_endonucleases 1k8a B 5S_rRNA_in_50S_subunit 1k8a A 23S_rRNAFreeForm 1u2a A U2_snRNA 1l2x A WesternYellowVirusRNA 1mfq A SRPRNASdomain 387d A Pseudoknot_inhibitor_of_HIV_reverse_transcriptase 1asy S Synthetase_complexe_tRNA_(Asp) 1esy A HIV-1_Psi_RNA_recognition_element 1n66 A poliovirus_RNA 7msf R Phage_coat_protein_binding 1n78 C Synthetase_complexe_tRNA_(Glu) 1fir A HIV-1_Reverse_Transcription_Primer_tRNA(Lys3) 1kuq B Central_domain,_complex_with_protein 1i4b A Brome_mosaic_virus_tRNA-like_sequence 1q96 A 28S_rRNA_Sarcin_/_ricin_loop 1q96 B 28S_rRNA_Sarcin_/_ricin_loop 1q96 C 28S_rRNA_Sarcin_/_ricin_loop 1k6h A RNAloop 1m5k B Hairpin_ribozyme 1ttt D Complexes_with_EF-Tu_tRNA_(Phe) 1ttt E Complexes_with_EF-Tu_tRNA_(Phe) 1ttt F Complexes_with_EF-Tu_tRNA_(Phe) 1jp0 A LP5.1Hairpin 1q82 A 23S_rRNAwithPuromycin 1hc8 D GTPase-associated_region,_complex_with_L11_protein 1hc8 C GTPase-associated_region,_complex_with_L11_protein 1k01 A 23S_rRNAwithChloramphenicol 1zdk S MS2_phage_coat_protein_binding_stem-loop 1zdk R MS2_phage_coat_protein_binding_stem-loop 1ivs C Synthetase_complexe_tRNA_(Val) 1jtw A HIV-1_STEM_LOOP_SL4 1a9n Q U2_snRNA 1a9n R U2_snRNA 1ebs A HIV-1_Rev_response_element_Rev_binding_site 1f79 A RNAsePRNAP4Stem 1uud B HIV_TAR_RNA 1asy R Synthetase_complexe_tRNA_(Asp) 1yfg A Initiator_tRNA 1tob A Tobramycin_binding 1nyb B Phage_transcriptional_antitermination_hairpin 2izn R MS2_phage_coat_protein_binding_stem-loop 1kh6 A InternalRibosomeEntrySite 1qa6 D GTPase-associated_region,_complex_with_L11_protein 1i9f A HIV-1_Rev_response_element_Rev_binding_site 483d A 23S_rRNA_Sarcin_/_ricin_loop 1i6u C Helix_21 1k6g A RNAloop 1i6u D Helix_21 1nji B 5S_rRNA_in_50S_subunit 1nji A 23S_rRNAwithChloramphenicol 1ato A Hepatitis_delta_virus_self-cleaving_ribozyme 1ow9 A VSRibozymeSubstrateStemLoop 1qc8 A Tau_exon_10_splicing_regulatory_element 2c4z S RNAHairpinComplexMS2CoatProtein 430d A 28S_rRNA_Sarcin_/_ricin_loop 1fka A 16S_rRNAFreeForm 1hr2 A G1intronP4P6 1hnw A 16S_rRNAwithTetracycline 1n36 A 16S_rRNAFreeForm 1hs8 A S2(G8)Hairpin 1k2g A G1intronP7P9