Farabella, I., Di Stefano, M., Soler-Vila, P., Marti-Marimon, M. and Marti-Renom, M.A. | ||
"Three-dimensional genome organization via triplex forming RNAs" | ||
Nature Structural and Molecular Biology (2021) 28(11) 945-954 | ||
Nguyen, H.Q., Chattoraj, S., Castillo, D., Nguyen, S.C., Nir, G., Martins, N.M.C., Reginato, P.R., Hannan, M., Church, G.M., Daugharthy, E.R., Marti-Renom, M.A. and Wu, C.T. | ||
"3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing" | ||
Nature Methods (2020) 17 822–832 | ||
Di Stefano, M., Stadhouders, R., Farabella, I., Castillo, D., Serra, F., Graf, T. and Marti-Renom, M.A. | ||
"Transcriptional activation during cell reprogramming correlates with the formation of 3D open chromatin hubs" | ||
Nature Communications (2020) 11 2564 | ||
Nir, G., Farabella, I., Pérez Estrada, C., Ebeling, C.G., Beliveau, B.J., Sasaki, H.M., Lee, S.H., Nguyen, S.C., McCole, R.B., Chattoraj, S., Erceg, J., Abed, J.A., Martins, N.M.C., Nguyen, H.Q., Hannan, M.A., Russell, S., Durand, N.C., Rao, S.S.P., Kishi, J.Y., Soler-Vila, P., Di Pierro, M., Onuchic, J.N., Callahan, S., Schreiner, J., Stuckey, J., Yin, P., Lieberman Aiden, E., Marti-Renom, M.A. and Wu, C.T. | ||
"Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling" | ||
PLOS Genetics (2018) 14(12) e1007872 | ||
Serra, F., Baů, D., Goodstadt, M., Castillo, D., Filion, F. and Marti-Renom, M.A. | ||
"Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors" | ||
PLOS Computational Biology (2017) 13(7) e1005665 | ||